The insertions of one sample are read at a time, so the memory cost is
that of a single sample.
Usage
accObservedMatrix(files, tfbs, samples, ignoreStrand = TRUE)
Arguments
- files
Paths of the per sample insertion site files.
- tfbs
A named list of prepared binding sites.
- samples
Sample identifiers, used as column names.
- ignoreStrand
If TRUE, strand information is ignored.
Value
A matrix of motifs by samples.
Examples
if (FALSE) { # \dontrun{
accObservedMatrix(files, tfbs, samples)
} # }