Return a SummarizedExperiment object of count values
# S4 method for class 'DsATAC'
getCountsSE(.object, type, naIsZero = TRUE)DsATAC object
character string specifying the region type
should NAs in the count matrix be considered 0 value (instead of unknown/missing)
SummarizedExperiment containing counts for each region and sample
if (FALSE) { # \dontrun{
dsa <- ChrAccRex::loadExample("dsAtac_ia_example")
se <- getCountsSE(dsa, "IA_prog_peaks")
se
} # }