getCovg-methods

Return table of read coverage values

# S4 method for DsNOMe
getCovg(.object, type = "sites", asMatrix = FALSE)

Arguments

.object

DsNOMe object

type

character string specifying the rgion type or "sites" (default)

asMatrix

return a matrix instead of a data.table

Value

data.table or matrix containing read coverage for each site/region and sample

Author

Fabian Mueller