getMotifDistMat.jaspar

Retrieve motif a comparison table from JASPAR annotation website and construct a dissimilarity matrix for given motif IDs

getMotifDistMat.jaspar(motifIds = NULL, scoreCol = "Ncor")

Arguments

motifIds

string vector of motif ids whose dissimilarities are retrieved

scoreCol

namew of the annotation column in the JASPAR annotation that contains the motif similarity

Value

a matrix of motif DISsimilarities