run_atac_differential

Run differential analyses for ATAC-seq data

run_atac_differential(dsa, anaDir, chromVarObj = NULL)

Arguments

dsa

DsATAC object

anaDir

analysis directory

chromVarObj

[optional] pre-computed result of a call to run_atac_chromvar(...)

Value

S3 object containing differential analysis results and an analysis report object

Author

Fabian Mueller