Volcano plot of ASC effect size vs significance

Volcano plot of ASC effect size vs significance

plotASCVolcano(
  dsObj,
  stats = NULL,
  sample = NULL,
  minCoverage = 10,
  sigCut = 0.1
)

Arguments

dsObj

A DsASC object.

stats

Optional output of calcASCStatistics. If NULL it is computed with the given minCoverage.

sample

Optional single sampleId to restrict the plot to.

minCoverage

Passed to calcASCStatistics if stats is NULL (default 10).

sigCut

FDR threshold for highlighting (default 0.1).

Value

A ggplot object.